If I have a favorite Naruto villain, I also have the one that I consider to be the most irritating villain in the narutoverse, and this is Danzo. Truthfully, the guy isn't really at fault for why I dislike him, but he is the reason behind majority of Konoha's problems just because he is an excellent manipulator- which is both amazing and annoying. I'm pretty sure that if Sasuke didn't kill him, his Kotoamatsukami and Izanagi would have made more problems for Konoha. Still, the man fought well for someone his age and for that, I do (kind of) applaud him.
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